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JC Rozum, R Albert
Leveraging network structure in nonlinear control
npj Systems Biology and Applications, 2022
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C Campbell, L Russo, R Albert, A Buckling, K Shea
PLOS Computational Biology, 2022
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P Maheshwari, SM Assmann, R Albert
Frontiers in Genetics, 2022
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JC Rozum, D Deritei, KH Park, J Gomez Tejeda Zanudo, R Albert
Bioinformatics, 2022
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E Newby, J Gomez Tejeda Zañudo, R Albert
Chaos: An Interdisciplinary Journal of Nonlinear Science, 2022
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F Sadat Fatemi Nasrollahi, J Gomez Tejeda Zanudo, C Campbell, R Albert
Physical Review E, 2021
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VK Mony, A Drangowska-Way, R Albert, E Harrison, A Ghaddar, MK Horak, W Ke, EJ O’Rourke
Proceedings of the National Academy of Sciences, 2021
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DJ Wooten, M Gebru, HG Wang, R Albert
Journal of Personalized Medicine, 2021
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J Gomez Tejeda Zanudo, P Mao, C Alcon, K Kowalski, GN Johnson, G Xu, J Baselga, M Scaltriti, A Letai, J Montero, R Albert, N Wagle
Cancer research, 2021
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JC Rozum, JGT Zanudo, X Gan, D Deritei, R Albert
Science Advances, 2021
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DJ Wooten, JGT Zanudo, D Murrugarra, AM Perry, A Dongari-Bagtzoglou, R Laubenbacher, CJ Nobile, R Albert
PLoS Computational Biology, 2021
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P Maheshwari, SM Assmann, R Albert
Frontiers in Physiology, 2020
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D Deritei, J Rozum, E Ravasz Regan, R Albert
Scientific Reports, 2019
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P Maheshwari, H Du, J Sheen, SM Assmann, R Albert
PLoS Comp. Biology, 2019
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Jorge GT Zanudo, MT Guinn, K Farquhar, M Szenk, SN Steinway, G Balazsi, R Albert
Physical Biology, 2019
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C Campbell, R Albert
Chaos, 2019
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JC Rozum, R. Albert
J. Theor. Biol, 2018
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JC Rozum, R. Albert
PLoS Comput Biol, 2018
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X Gan, R Albert
Phys Rev E, 2018
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JGT Zanudo, SN Steinway, R Albert
Current opinion in Systems Biology, 2018
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G Yang, JGT Zanudo, R Albert
Frontiers in Physiology, 2018
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P Maheshwari, R. Albert
BMC Systems Biology, 2017
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R Albert, BR Acharya, BW Jeon, JGT Zanudo, M Zhu, K Osman, S. Assmann
PLoS Biology, 2017
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J Gomez Tejeda Zanudo, R Albert
bioRxiv, 2017
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C Campbell, S Aucott, J Ruths, D Ruths, K Shea, R Albert
Scientific Reports, 2017
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G Yang, C Campbell, R Albert
Physical Review E, 2017
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Z Sun, R Albert
Network Science, 2017
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X Gan, R Albert
BMC Systems Biology, 2017
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Zanudo, Jorge GT; Yang, Gang; Albert, Reka;
Proceedings of the National Academy of Sciences , 2017
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Campbell, Colin; Shea, Katriona; Yang, Suann; Albert, Reka;
Journal of Complex Networks, 2016
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Saadatpour, Assieh; Albert, Reka;
EPJ Nonlinear Biomedical Physics, 2016
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Zanudo, Jorge GT; Albert, Reka;
PLoS Comput Biol, 2015
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Campbell, Colin; Yang, Suann; Albert, Reka; Shea, Katriona;
Oikos, 2015
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Albert, Reka; Robeva, Raina;
Algebraic and discrete mathematical methods for modern biology, 2015
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Rajtmajer, Sarah M; Roy, Arnab; Albert, Reka; Molenaar, Peter CM; Hillary, Frank G;
Frontiers in neuroanatomy, 2015
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Campbell, Colin; Ruths, Justin; Ruths, Derek; Shea, Katriona; Albert, Reka;
Scientific reports, 2015
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Steinway, Steven Nathaniel; Zanudo, Jorge Gomez Tejeda; Michel, Paul J; Feith, David J; Loughran, Thomas P; Albert, Reka;
NPJ Systems Biology and Applications, 2015
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LaBar, Thomas; Campbell, Colin; Yang, Suann; Albert, Reka; Shea, Katriona;
Theoretical ecology, 2014
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Albert, Reka; DasGupta, Bhaskar; Mobasheri, Nasim;
Physical Review E, 2014
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Campbell, Colin; Albert, Reka;
BMC systems biology, 2014
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Jones, Alexander M; Xuan, Yuanhu; Xu, Meng; Wang, Rui-Sheng; Ho, Cheng-Hsun; Lalonde, Sylvie; You, Chang Hun; Sardi, Maria I; Parsa, Saman A; Smith-Valle, Erika;
Science, 2014
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Albert, Reka; Thakar, Juilee;
Wiley Interdisciplinary Reviews: Systems Biology and Medicine, 2014
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Steinway, Steven Nathaniel; Zanudo, Jorge GT; Ding, Wei; Rountree, Carl Bart; Feith, David J; Loughran, Thomas P; Albert, Reka;
Cancer research, 2014
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Campbell, Colin; Shea, Katriona; Albert, Reka;
Science, 2014
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Sun, Zhongyao; Jin, Xiaofen; Albert, Reka; Assmann, Sarah M;
PLoS Comput Biol, 2014
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Saadatpour, Assieh; Albert, Reka;
Methods, 2013
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Lass, Sandra; Hudson, Peter J; Thakar, Juilee; Saric, Jasmina; Harvill, Eric; Albert, Reka; Perkins, Sarah E;
Journal of The Royal Society Interface, 2013
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Saadatpour, Assieh; Albert, Reka; Reluga, Timothy C;
SIAM Journal on Applied Dynamical Systems, 2013
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Wang, Rui-Sheng; Albert, Reka;
Physical Review E, 2013
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Wang, Rui-Sheng; Sun, Zhongyao; Albert, Reka;
International Transactions in Operational Research, 2013
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LaBar, Thomas; Campbell, Colin; Yang, Suann; Albert, Reka; Shea, Katriona;
Theoretical ecology, 2013
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Zanudo, Jorge GT; Albert, Reka;
Chaos: An Interdisciplinary Journal of Nonlinear Science, 2013
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Albert, Reka; Collins, James J; Glass, Leon;
Chaos: An Interdisciplinary Journal of Nonlinear Science, 2013
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Yang, Suann; Albert, Reka; Carlo, Tomas A;
Ecosphere, 2013
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Jin, Xiaofen; Wang, Rui-Sheng; Zhu, Mengmeng; Jeon, Byeong Wook; Albert, Reka; Chen, Sixue; Assmann, Sarah M;
The Plant Cell, 2013
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Cui, LiYing; Kumara, Soundar; Albert, Reka;
Handbook of Optimization in Complex Networks, 2012
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Thakar, Juilee; Pathak, Ashutosh K; Murphy, Lisa; Albert, Reka; Cattadori, Isabella M;
Plos Comput biol, 2012
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Motter, Adilson E; Albert, Reka;
Phys. Today, 2012
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Campbell, Colin; Yang, Suann; Shea, Katriona; Albert, Reka;
Physical Review E, 2012
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Wang, Rui-Sheng; Saadatpour, Assieh; Albert, Reka;
Physical biology, 2012
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Saadatpour, Assieh; Albert, Reka;
Computational Modeling of Signaling Networks, 2012
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Wang, Rui-Sheng; Albert, Reka;
BMC Systems biology, 2011
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Campbell, Colin; Yang, Suann; Albert, Reka; Shea, Katriona;
Proceedings of the National Academy of Sciences, 2011
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Walsh, Elizabeth R; Thakar, Juilee; Stokes, Kindra; Huang, Fei; Albert, Reka; August, Avery;
The Journal of Immunology, 2011
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Wang, Rui-Sheng; Pandey, Sona; Li, Song; Gookin, Timothy E; Zhao, Zhixin; Albert, Reka; Assmann, Sarah M;
BMC genomics, 2011
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Albert, Reka; DasGupta, Bhaskar; Hegde, Rashmi; Sivanathan, Gowri Sangeetha; Gitter, Anthony; Gursoy, Gamze; Paul, Pradyut; Sontag, Eduardo;
Physical Review E, 2011
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Campbell, Colin; Thakar, Juilee; Albert, Reka;
Physical Review E, 2011
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Saadatpour, Assieh; Wang, Rui-Sheng; Liao, Aijun; Liu, Xin; Loughran, Thomas P; Albert, Istvan; Albert, Reka;
PLoS Comput Biol, 2011
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Campbell, Colin; Zhang, Ranran; Haley, Jeremy Scott; Liu, Xin; Loughran, Thomas; Schell, Todd; Albert, Reka; Thakar, Juilee;
Frontiers in Systems Physiology, 2011
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Pandey, Sona; Wang, Ruishengg; Wilson, Liza; Li, Song; Zhao, Zhixin; Gookin, Timothy E; Assmann, Sarah M; Albert, Reka;
Molecular systems biology, 2010
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Cui, LiYing; Kumara, Soundar; Albert, Reka;
Complex networks: An engineering view
IEEE Circuits and Systems Magazine, 2010
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Christensen, Claire; Albert, Istvan; Grenfell, Bryan; Albert, Reka;
Disease dynamics in a dynamic social network
Physica A: Statistical Mechanics and its Applications, 2010
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Thakar, Juilee; Albert, Reka;
Boolean models of within-host immune interactions
Current opinion in microbiology, 2010
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Saadatpour, Assieh; Albert, Istvan; Albert, Reka;
Attractor analysis of asynchronous Boolean models of signal transduction networks
Journal of theoretical biology, 2010
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Albert, Reka; DasGupta, Bhaskar; Sontag, Eduardo;
Inference of signal transduction networks from double causal evidence
Computational Biology, 2010
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Thakar, Juilee; Albert, Reka;
Boolean Networks in Inference and Dynamic Modeling of Biological Systems at the Molecular and Physiological Level
Handbook On Biological Networks, 2010
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Albert, Reka; Wang, Rui-Sheng;
Discrete dynamic modeling of cellular signaling networks
Methods in enzymology, 2009
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Thakar, Juilee; Saadatpour-Moghaddam, Assieh; Harvill, Eric T; Albert, Reka;
Constraint-based network model of pathogen immune system interactions
Journal of the Royal Society Interface, 2009
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Albert, Reka; Assmann, Sarah M;
An Overview of Systems Biology
Annual Plant Reviews, Plant Systems Biology, 2009
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Thakar, Juilee; Albert, Reka;
Boolean Networks in Inference and Dynamic Modeling of Biological Systems at the Molecular and Physiological Level
Handbook on Biological Networks, World Scientific, Singapore, 2009
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Zhang, Ranran; Shah, Mithun Vinod; Yang, Jun; Nyland, Susan B; Liu, Xin; Yun, Jong K; Albert, Reka; Loughran, Thomas P;
Network model of survival signaling in large granular lymphocyte leukemia
Proceedings of the National Academy of Sciences, 2008
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Albert, Reka; DasGupta, Bhaskar; Dondi, Riccardo; Sontag, Eduardo;
Inferring (biological) signal transduction networks via transitive reductions of directed graphs
Algorithmica, 2008
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Kachalo, Sema; Zhang, Ranran; Sontag, Eduardo; Albert, Reka; DasGupta, Bhaskar;
NET-SYNTHESIS: a software for synthesis, inference and simplification of signal transduction networks
Bioinformatics, 2008
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Tyson, John J; Albert, Reka; Goldbeter, Albert; Ruoff, Peter; Sible, Jill;
Biological switches and clocks
Journal of The Royal Society Interface, 2008
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Chaves, Madalena; Albert, Reka;
Studying the effect of cell division on expression patterns of the segment polarity genes
Journal of The Royal Society Interface, 2008
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Thakar, Juilee; Christensen, Claire; Albert, Reka;
Toward understanding the structure and function of cellular interaction networks
Handbook of Large-Scale Random Networks, 2008
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Albert, Istvan; Thakar, Juilee; Li, Song; Zhang, Ranran; Albert, Reka;
Boolean network simulations for life scientists
Source Code for Biology and Medicine, 2008
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Wijeratne, Asela J; Zhang, Wei; Sun, Yujin; Liu, Wenlei; Albert, Reka; Zheng, Zhengui; Oppenheimer, David G; Zhao, Dazhong; Ma, Hong;
Differential gene expression in Arabidopsis wild_��type and mutant anthers: insights into anther cell differentiation and regulatory networks
The Plant Journal, 2007
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Albert, Reka;
Network inference, analysis, and modeling in systems biology
The Plant Cell, 2007
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Thakar, Juilee; Pilione, Mylisa; Kirimanjeswara, Girish; Harvill, Eric T; Albert, Reka;
Modeling systems-level regulation of host immune responses
PLoS Comput Biol, 2007
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Albert, Reka; DasGupta, Bhaskar; Dondi, Riccardo; Kachalo, Sema; Sontag, Eduardo; Zelikovsky, Alexander; Westbrooks, Kelly;
A novel method for signal transduction network inference from indirect experimental evidence
Journal of Computational Biology, 2007
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Christensen, C; Thakar, J; Albert, R;
Systems-level insights into cellular regulation: inferring, analysing, and modelling intracellular networks
IET systems biology, 2007
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Christensen, Claire; Albert, Reka;
Using graph concepts to understand the organization of complex systems
International Journal of Bifurcation and Chaos, 2007
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Cattadori, Isabella M; Albert, Reka; Boag, Brian;
Variation in host susceptibility and infectiousness generated by co-infection: the myxoma Trichostrongylus retortaeformis case in wild rabbits
Journal of the Royal Society Interface, 2007
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Thadakamalla, HP; Albert, Reka; Kumara, SRT;
Search in spatial scale-free networks
New Journal of Physics, 2007
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Albert, Reka; Oltvai, Zoltan N;
Shaping specificity in signaling networks
Nature genetics, 2007
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Christensen, Claire; Gupta, Anshuman; Maranas, Costas D; Albert, Reka;
Large-scale inference and graph-theoretical analysis of gene-regulatory networks in B. Subtilis
Physica A: Statistical Mechanics and its Applications, 2007
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Joo, Jaewook; Harvill, Eric; Albert, Reka;
Effects of Noise on Ecological Invasion Processes: Bacteriophage-Mediated Competition in Bacteria
Journal of Statistical Physics, 2007
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Raghavan, Usha Nandini; Albert, Reka; Kumara, Soundar;
Near linear time algorithm to detect community structures in large-scale networks
Physical review. E, Statistical, nonlinear, and soft matter physics, 2007
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Li, Song; Assmann, Sarah M; Albert, Reka;
Predicting essential components of signal transduction networks: a dynamic model of guard cell abscisic acid signaling
PLoS Biol, 2006
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Chaves, Madalena; Sontag, Eduardo D; Albert, Reka;
Methods of robustness analysis for Boolean models of gene control networks
IEE Proc. Syst. Biol, 2006
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Gupta, Anshuman; Maranas, Costas D; Albert, Reka;
Elucidation of directionality for co-expressed genes: predicting intra-operon termination sites
Bioinformatics, 2006
-
Joo, Jaewook; Gunny, Michelle; Cases, Marisa; Hudson, Peter; Albert, Reka; Harvill, Eric;
Bacteriophage-mediated competition in Bordetella bacteria
Proceedings of the Royal Society of London B: Biological Sciences, 2006
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Chaves, Madalena; Sontag, Eduardo D; Albert, Reka;
Structure and timescale analysis in genetic regulatory networks
Proceedings of the 45th IEEE Conference on Decision and Control, 2006
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Albert, Reka;
Scale-free networks in cell biology
Journal of cell science, 2005
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Chaves, Madalena; Albert, Reka; Sontag, Eduardo D;
Robustness and fragility of Boolean models for genetic regulatory networks
Journal of theoretical biology, 2005
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Kinney, Ryan; Crucitti, Paolo; Albert, Reka; Latora, Vito;
Modeling cascading failures in the North American power grid
The European Physical Journal B-Condensed Matter and Complex Systems, 2005
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Thadakamalla, Hari P; Albert, Reka; Kumara, Soundar RT;
Search in weighted complex networks
Physical Review E, 2005
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Albert, Reka; Albert, Istvan; Nakarado, Gary L;
Structural vulnerability of the North American power grid
Physical review E, 2004
-
Albert, Istvan; Albert, Reka;
Conserved network motifs allow protein protein interaction prediction
Bioinformatics, 2004
-
Albert, Reka; Chiu, Yu-wen; Othmer, Hans G;
Dynamic Receptor Team Formation Can Explain the High Signal Transduction Gain in Escherichia coli
Biophysical journal, 2004
-
Albert, Reka; Othmer, Hans G;
The topology and signature of the regulatory interactions predict the expression pattern of the segment polarity genes in Drosophila melanogaster
Journal of Theoretical Biology, 2003
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Albert, R; Barabasi, AL;
Statistical mechanics of complex networks
Rev. Mod. Phys., 2002
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Albert, I; Tegzes, P; Albert, R; Sample, JG; Barabasi, A-L; Vicsek, T; Kahng, B; Schiffer, P;
Stick-slip fluctuations in granular drag
Physical Review E, 2001
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Albert, Reka; Jeong, Hawoong; Barabasi, Albert-Laszlo;
correction: Error and attack tolerance of complex networks
Nature, 2001
-
Albert, Reka; Jeong, Hawoong; Barabasi, Albert-Laszlo;
Error and attack tolerance of complex networks
Nature, 2000
-
Albert, I; Tegzes, P; Kahng, B; Albert, R; Sample, JG; Pfeifer, M; Barabasi, A-L; Vicsek, T; Schiffer, P;
Jamming and fluctuations in granular drag
Physical review letters, 2000
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Albert, Reka; Barabasi, Albert-Laszlo;
Topology of Evolving Networks: Local Events and Universality
Physical Review Letters, 2000
-
Albert, Reka; Barabasi, Albert-Laszlo;
Scaling Laws for the Period of Boolean Networks
Physical Review Letters, 2000
-
Jeong, H; Tombor, B; Albert, R; Oltvai, ZN; Barabasi, AL;
The large-scale organization of metabolic networks
Nature, 2000
-
Albert, R; Jeong, H; Barabasi, AL;
Diameter of the world-wide web
Nature, 1999
-
Barabasi, Albert-Laszlo; Albert, Reka; Jeong, Hawoong;
Mean-field theory for scale-free random networks
Physica A: Statistical Mechanics and its Applications, 1999
-
Barabasi, Albert-Laszlo; Albert, Reka;
Emergence of scaling in random networks
Science, 1999
-
Albert, R; Pfeifer, MA; Barabasi, A-L; Schiffer, P;
Slow drag in a granular medium
Physical review letters, 1999
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Barabasi, Albert-Laszlo; Albert, Reka; Schiffer, Peter;
The physics of sand castles: maximum angle of stability in wet and dry granular media
Physica A: Statistical Mechanics and its Applications, 1999
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Tegzes, P; Albert, R; Paskvan, M; Barabasi, AL; Vicsek, T; Schiffer, P;
Liquid-induced transitions in granular media
Physical Review E, 1999
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Albert, Reka; Barabasi, Albert-Laszlo; Carle, Nathan; Dougherty, Andrew;
Driven interfaces in disordered media: determination of universality classes from experimental data
Physical review letters, 1998
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Hornbaker, DJ; Albert, Reka; Albert, Istvan; Barabasi, Albert-Laszlo; Schiffer, Peter;
What keeps sandcastles standing?
Nature, 1997
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Albert, Reka; Albert, Istvan; Hornbaker, Daniel; Schiffer, Peter; Barabasi, Albert-Laszlo;
Maximum angle of stability in wet and dry spherical granular media
Physical Review E, 1997